K-medodis聚类算法MATLAB

function [cx,cost] = kMedoids(K,data,num)
%   生成将data聚成K类的最佳聚类
%   K为聚类数目，data为数据集,num为随机初始化次数
    [cx,cost] = kMedoids1(K,data);
    for i = 2:num
        [cx1,min] = kMedoids1(K,data);
        if min<cost
            cost = min;
            cx = cx1;
        end
    end
end

function [cx,cost] = kMedoids1(K,data)
%   把分类数据集data聚成K类
%   [cx,cost] = kmeans(K,data)
%   K为聚类数目，data为数据集
%   cx为样本所属聚类，cost为此聚类的代价值
% 选择需要聚类的数目

% 随机选择聚类中心
    centroids = data(randperm(size(data,1),K),:);
% 迭代聚类 
    centroids_temp = zeros(size(centroids));
    num = 0;
    while (~isequal(centroids_temp,centroids)&&num<20) 
        centroids_temp = centroids;
        [cx,cost] = findClosest(data,centroids,K);
        centroids = compueCentroids(data,cx,K);
        num = num+1;
    end
%     cost = cost/size(data,1);

end


function [cx,cost] = findClosest(data,centroids,K)
% 将样本划分到最近的聚类中心
    cost = 0;
    n = size(data,1);
    cx = zeros(n,1);
    for i = 1:n
%       曼哈顿距离
        [M,I] = min(sum(abs((data(i,:)-centroids))‘));
        cx(i) = I;
        cost = cost+M;
    end
end


function centroids = compueCentroids(data,cx,K)
% 计算新的聚类中心
    centroids = zeros(K,size(data,2));
    for i = 1:K
%       寻找代价值最小的当前聚类中心
        temp = data((cx==i),:);
        [~,I] = min(sum(squareform(pdist(temp))));
        centroids(i,:) = temp(I,:);
    end
end

% 主函数

% 生成符合高斯分布的数据
mu = [5,5];
sigma = [16,0;0,16];
sigma1 = [0.5,0;0,0.5];
data =  gaussianSample(8,50,mu,sigma,sigma1);

% 聚类
K = 6;
[cx,cost] = kMedoids(K,data,10);
plotMedoids(data,cx,K);